Kvitek D.J, Will J.L., and Gasch A.P. (2008). Variations in stress sensitivity and genomic expression in diverse S. cerevisiae isolates. PLoS Genetics PUBMED PDF Berry D.B. and Gasch A.P. (2008). Stress-activated genomic expression changes serve a preparative role for impending stress in yeast. Mol Biol. Cell PUBMED Gasch A.P. (2007). Comparative genomics of the environmental stress response in ascomycete fungi. Yeast PUBMED PDF Gasch A.P., Moses, A.M., Chiang, D.Y., Fraser, F.B., Berardini, M. and Eisen M.B. (2004). Conservation and evolution of cis-regulatory systems in ascomycete fungi PLoS Biology, 2(12): e398 PUBMED PDF Gasch A.P. and Eisen M.B. (2002). Exploring the conditional coregulation of yeast gene expression through fuzzy k-means clustering. Genome Biology, 3(11):research0059.1-0059.22 PUBMED PDF Gasch, A.P. (2002). The Environmental Stress Response: a common yeast response to environmental stresses. In Yeast Stress Responses. S. Hohmann and P. Mager (ed). Volume 1, Topics in Current Genetics (series editor S. Hohmann) Springer-Verlag Heidelberg p. 11-70 PDF Gasch, A.P., Werner-Washburne, M. (2002). The genomics of yeast responses to environmental stress and starvation. Funct. Integr. Genomics 2(4-5):181-192 PUBMED PDF Gasch, A.P. (2002). Yeast genomic expression studies using DNA microarrays. In Guide to Yeast Genetics and Molecular and Cellular Biology. C. Guthrie and G.R. Fink (ed). Methods in Enzymology. 350: 393-414 Doc Yoshimoto, H., Saltsman, K., Gasch, A.P., Li H.X., Ogawa, N., Botstein, D., Brown, P.O., Cyert, M.S. (2002). Genome-wide analysis of gene expression regulated by the calcinneurin/Crz1p signaling pathway in Saccharomyces cerevisiae. J Biol Chem. 277(34):31079-31088 PUBMED Gasch, A.P., Huang, M., Metzner, S., Elledge, S.J., Botstein, D., Brown, P.O. (2001). Genomic expression responses to DNA-damaging agents and the regulatory role of the yeast ATR homolog Mec1p. Mol. Biol. Cell 12(10):2987-3003 PUBMED Segal, E., Taskar, B., Gasch, A.P., Friedman, N., Koller, D. (2001). Rich Probabilistic Models for Gene Expression. ISMB 17(1):243-252 PUBMED Lee, S.L., Pellichioli, A., Demeter, J., Vaze, M., Gasch, A.P. Malkova, A., Brown, P.O., Stearns, T., Foiani, M. and Haber, J.E. (2001). Arrest, adaptation and recovery following a chromosome double-strand break in Saccharomyces cerevisiae. Cold Spring Harb. Symp. Quant. Biol. 65: 303-314 Carmel-Harel, O., Stearman, R., Gasch, A.P., Botstein, D., Brown, P.O., and Storz, G. (2001). Role of Thioredoxin Reductase in Regulating the Yap1p-Dependent Response to Oxidative Stress in Saccharomyces cerevisiae. Mol. Micro. 39(3):595-605 PUBMED Gasch, A.P., Spellman, P.T., Kao, C.M., Carmel-Harel, O., Eisen, M.B., Storz, G., Botstein, D., Brown, P.O. (2000). Genomic expression programs in the response of yeast cells to environmental changes. Mol. Biol. Cell 11(12):4241-4257 PUBMED Lyons, T.J., Gasch, A.P., Gaither, L.A., Botstein, D., Brown, P.O., Eide, D.J. (2000). Genome- wide characterization of the Zap1p zinc-responsive regulon in yeast. PNAS. 97(14):7957-7963 PUBMED Weinreich, M.D., Gasch, A.P., Reznikoff, W.S. (1994). Evidence that the cis preference of the Tn5 transposase is caused by nonproductive multimerization. Genes & Dev. 8(19):2363-2374 PUBMED